About PI

Designation: Additional Professor; INSA fellow

Address: Room No. 3020, Department of Biochemistry, Third Floor, Teaching Block, AIIMS, New Delhi

Official phone: +91-11-2659 4027

Email ID: subhradip.k@aiims.edu

I am an Additional Professor of Biochemistry, and my research is focused on establishing several novel tissue culture models and 3D systems like an organ-on-chip to study complex biological processes and actively engage myself in Bioinformatics and extensive data analysis. My lab works extensively in understanding the molecular mechanism for cancer using an OMICS-based approach. When not doing science, my hobbies are music, poetry, and exploring nature.

KEY PUBLICATIONS:

1. Ajmeriya, Swati; Bharti, Deepak Ramkumar; Kumar, Amit; Rana, Shweta; Singh, Harpreet; Karmakar, Subhradip; 2024 In silico approach for the identification of tRNA-derived small non-coding RNAs in SARS-CoV infection Journal of Applied Genetics (), pp.45597
2. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2024 Therapeutic siRNAs: small molecules with bigger function Asian Journal of Medical Sciences 15(1), pp.45323
3. Karmakar, S; Kala, PC; Humnekar, A; 2024 The curious case of milk collection under skin graft over the breast: Lessons learned! Journal of Postgraduate Medicine 70(1), pp.53-55
4. Dhar, Ruby; Aidasani, Hiya; Sahoo, Om Saswat; Kumar, Arun; Karmakar, Subhradip; 2024 JN. 1: The new COVID-19 variant of concern? Asian Journal of Medical Sciences 15(2), pp.
5. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2024 Intron retention: What that means for the biologist Asian Journal of Medical Sciences 15(2), pp.45323
6. Joon, Archana; Sharma, Anshita; Jalandra, Rekha; Bayal, Nitin; Dhar, Ruby; Karmakar, Subhradip; 2024 Nonalcoholic Fatty Liver Disease and Gut-liver Axis: Role of Intestinal Microbiota and Therapeutic Mechanisms Journal of Translational Gastroenterology (0), pp.0-0
7. Sahoo, Om Saswat; Pethusamy, Karthikeyan; Nayek, Arnab; Minocha, Rashmi; Dhar, Ruby; Karmakar, Subhradip; 2024 Paradigm of immune dysregulation in coronavirus disease-2019 infection Exploration of Immunology 4(), pp.12055
8. William, Jonahunnatha Nesson George; Dhar, Ruby; Gundamaraju, Rohit; Sahoo, Om Saswat; Pethusamy, Karthikeyan; Raj, AFP; Ramasamy, Subbiah; Alqahtani, Mohammed S; Abbas, Mohamed; Karmakar, Subhradip; 2024 SKping cell cycle regulation: role of ubiquitin ligase SKP2 in hematological malignancies Frontiers in Oncology 14(), pp.1288501
9. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2024 Dimensional advantage: How 3D organoids are re-shaping the oncology research. Asian Journal of Medical Sciences 15(3), pp.
10. Karmakar, Abhibroto; Singh, Ajit; Chhabra, Anchal; Madaan, Shyna; Prabhu, Smita; Maheshwari, Rahul; Ravindran, Vinod; Prasad, Shankar; Kumar, Uma; Karmakar, Subhradip; 2024 LBP3 Comparative evaluation of ChatGPT and google bard as artificial intelligence-based tools together with expert validation in SLE patient’s education (), pp.
11. Sarkar, Sajib Kumar; Minocha, Rashmi; Dash, Nihar Ranjan; Dhar, Ruby; Das, Prasenjit; Kumar, Deepak; Kapoor, Vinay Kumar; Shukla, Ratnakar; Karmakar, Subhradip; 2024 High throughput screening of nuclear receptors identifies NR4A1, a novel tumor suppressor with potential as a therapeutic target in gallbladder cancer medRxiv (), pp.2024.03. 13.24304218
12. Karmakar, Abhibroto; Kumar, Uma; Prabhu, Smita; Ravindran, Vinod; Prasad, Shankar; Varashree, BS; Karmakar, Subhradip; Prabhu, Mukhyaprana M; 2024 P68 Comparative analysis of efficiencies of immunosuppressive drugs in SLE with different clinical presentation and their molecular stratification: a prospective study from India (), pp.
13. Sarkar, Sajib; Srivastava, Tryambak Pratap; Sahoo, Om Saswat; Shankar, Abhishek; Rai, Avdhesh; Pethusamy, Karthikeyan; Dhar, Ruby; Karmakar, Subhradip; 2024 Applications of Quantum Dots in Preventive Oncology Asian Pacific Journal of Cancer Prevention 25(3), pp.747-756
14. Panaiyadiyan, Sridhar; Nayak, Brusabhanu; Singh, Prabhjot; Kaushal, Seema; Karmakar, Subhradip; Seth, Amlesh; 2023 Prognostic and predictive role of intra-tumoral CXCR1 expression in patients receiving tyrosine kinase inhibitors for metastatic clear-cell renal cell carcinoma Journal of Clinical Urology 16(2), pp.113-120
15. Saikrishna, Kanukuntla; Talukdar, Daizee; Das, Santanu; Bakshi, Susmita; Chakravarti, Priyanka; Jana, Pradipta; Karmakar, Subhradip; Wig, Naveet; Das, Bhabatosh; Ray, Animesh; 2023 Study on effects of probiotics on gut microbiome and clinical course in patients with critical care illnesses Microbial Ecology 86(3), pp.1814-1828
16. Purkayastha, Kakali; Dhar, Ruby; Pethusamy, Karthikeyan; Srivastava, Tryambak; Shankar, Abhishek; Rath, Goura Kishor; Karmakar, Subhradip; 2023 The issues and challenges with cancer biomarkers Journal of Cancer Research and Therapeutics 19(Suppl 1), pp.S20-S35
17. Mukherjee, Indrani; Singh, Sunil; Karmakar, Abhibrato; Kashyap, Neha; Mridha, Asit Ranjan; Sharma, Jai Bhagwan; Luthra, Kalpana; Sharma, Radhey Shyam; Biswas, Subhrajit; Dhar, Ruby; 2023 New immune horizons in therapeutics and diagnostic approaches to Preeclampsia American Journal of Reproductive Immunology 89(2), pp.e13670
18. Dhar, Ruby; Nayek, Arnab; Kumar, Arun; Karmakar, Subhradip; 2023 Fossil detectives: How the 2022 noble prize winners unearthed the journey of human evolution Asian Journal of Medical Sciences 14(3), pp.45323
19. Mukherjee, Indrani; Biswas, Subhrajit; Singh, Sunil; Talukdar, Joyeeta; Alqahtani, Mohammed S; Abbas, Mohamed; Nag, Tapas Chandra; Mridha, Asit Ranjan; Gupta, Surabhi; Sharma, Jai Bhagwan; 2023 Monosodium glutamate perturbs human trophoblast invasion and differentiation through a reactive oxygen species-mediated pathway: An in-vitro assessment Antioxidants 12(3), pp.634
20. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Checkmate with checkpoint inhibitors: New paradigm in immunotherapy Asian Journal of Medical Sciences 14(4), pp.45323
21. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Tree elements: Branching hopes after tissue injury in regenerative medicine Asian Journal of Medical Sciences 14(5), pp.45323
22. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Ranking prognosis: Future perspective of RANK/RANKL in breast cancer Asian Journal of Medical Sciences 14(6), pp.45323
23. Sahoo, Om Saswat; Pethusamy, Karthikeyan; Nayek, Arnab; Minocha, Rashmi; Dhar, Ruby; Karmakar, Subhradip; 2023 The Paradigm of Immune dysregulation in COVID-19 infection (), pp.
24. Sahoo, Om Saswat; Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Challenges and lessons from COVID-19. Asian Journal of Medical Sciences 14(7), pp.
25. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Uridine as a novel fuel for cancer cells Asian Journal of Medical Sciences 14(7), pp.45323
26. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Gestational diabetes: The epicenter of feto-maternal crisis Asian Journal of Medical Sciences 14(9), pp.45323
27. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Indian twin registry: A gold mine for genetic studies Asian Journal of Medical Sciences 14(8), pp.45323
28. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Monobodies and nanobodies: The era of diagnostic miniature antibodies Asian Journal of Medical Sciences 14(10), pp.45323
29. Seethy, Ashikh A; Pethusamy, Karthikeyan; Kushwaha, Tushar; Kumar, Gaurav; Talukdar, Joyeeta; Chaubey, Rekha; Sundaram, Udayakumar Dharmalingam; Mahapatra, Manoranjan; Saxena, Renu; Dhar, Ruby; 2023 Alterations of the expression of TET2 and DNA 5-hmC predict poor prognosis in Myelodysplastic Neoplasms BMC cancer 23(1), pp.1035
30. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Maternal dietary habit influences fetal life Asian Journal of Medical Sciences 14(11), pp.45323
31. Srivastava, Tryambak Pratap; Dhar, Ruby; Sahoo, Om Saswat; Aidasani, Hiya; Rai, Avdesh; Kumar, Arun; Karmakar, Subhradip; 2023 Illuminating oncology research by bioluminescent imaging. Asian Journal of Medical Sciences 14(11), pp.
32. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2023 Smart wearable devices for real-time health monitoring Asian Journal of Medical Sciences 14(12), pp.45352
33. Talukdar, Joyeeta; Srivastava, Tryambak P; Sahoo, Om S; Karmakar, Abhibroto; Rai, Avdhesh K; Sarma, Anupam; Gogoi, Gayatri; Alqahtani, Mohammed S; Abbas, Mohamed; Dhar, Ruby; 2023 Cancer stem cells: Signaling pathways and therapeutic targeting MedComm–Oncology 2(4), pp.e62
34. Raj, Ankita; Singh, Sunil; Mukherjee, Indrani; Kashyap, Neha; Dhar, Ruby; Karmakar, Subhradip; 2023 Role of Cortisol on human trophoblast invasion and differentiation Placenta 140(), pp.e59
35. Singh, Sunil; Dhar, Ruby; Karmakar, Subhradip; Quadri, Javed Ahsan; Mani, Kamaraj; 2023 UPM-mediated epigenetic modifications disrupt invasion and differentiation in placental trophoblast cells: Investigating the impact of environmental air pollution on placental and fetal health. Placenta 140(), pp.e60
36. Dhar, Ruby; Talukdar, Joyeeta; Nayek, Arnab; Ajmeriya, Swati; Kumar, Arun; Karmakar, Subhradip; 2022 Unveiling the omicron B. 1.1. 529: the variant of concern that is rattling the globe Asian Journal of Medical Sciences 13(1), pp.166-168
37. Abel, M; Leyh, J; Kihm, L; Witkowski, M; 2022 Cell to cell hijacking: Role of membrane nanotubes Asian Journal of Medical Sciences 13(1), pp.1
38. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2022 How COVID 19 pandemic may end: Coexistence is the key Asian Journal of Medical Sciences (), pp.45323
39. Ajmeriya, Swati; Kumar, Amit; Karmakar, Subhradip; Rana, Shweta; Singh, Harpreet; 2022 Neutralizing antibodies and antibody-dependent enhancement in COVID-19: A perspective Journal of the Indian Institute of Science 102(2), pp.671-687
40. Dhar, Ruby; Talukdar, Joyeeta; Kumar, Arun; Karmakar, Subhradip; 2022 The problem with APC and open access: Hurdles in publishing practice Asian Journal of Medical Sciences 13(3), pp.45323
41. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2022 The innocence of Omicron: Taking the right decision Asian Journal of Medical Sciences 13(3), pp.170-171
42. Guha, Samudra; Talukdar, Joyeeta; Karmakar, Abhibrato; Goswami, Sandeep; Kumar, Arun; Dhar, Ruby; Karmakar, Subhradip; 2022 Synthetic biology: the new era Asian J. Med. Sci 13(), pp.200-203
43. Bharat, SS; Makkar, N; Karmakar, S; Singh, AK; 2022 A novel technique to widen the 1st web space by using’spare parts’ of thumb polydactyly Sri Lanka Journal of Surgery 40(1), pp.
44. Talukdar, Joyeeta; Srivastava, Tryambak Pratap; Gogoi, Gayatri; Rai, Avdhesh; Dhar, Ruby; Karmakar, Subhradip; 2022 Oncometabolite profiling identifying estrogen-responsive genes in breast cancer. (), pp.
45. Singh, Sunil; Dhar, Ruby; Karmakar, Subhradip; 2022 Fenofibrate mediated activation of PPARα negatively regulates trophoblast invasion Placenta 126(), pp.140-149
46. Srivastava, Tryambak Pratap; Dhar, Ruby; Srivastava, Anurag; Deo, SVS; Parshad, Rajinder; Karmakar, Subhradip; 2022 Functional characterization of Androgen Receptor splice variants in breast cancer invasion and metastasis Cancer Research 82(12_Supplement), pp.6398-6398
47. Dhar, Ruby; Rana, Shweta; Srivastava, Tryambak Pratap; Nayek, Arnab; Sharma, Jai Bhagwan; Kaur, Digjeet; Kalari, Krishna R; Singh, Harpreet; Karmakar, Subhradip; 2022 India’s Opportunities and Challenges in Establishing a Twin Registry: An Unexplored Human Resource for the World’s Second-Most Populous Nation Twin Research and Human Genetics 25(3), pp.156-164
48. Talukdar, D; Haldar, AK; Dastidar, R; Kumar, S; Lodha, M; Banerjee, A; Karmakar, S; Sikder, K; 2022 Inflammation-related Biomarkers Are Associated With Severity Of Idiopathic Dilated Cardiomyopathy (IDCM): ABrief Report On Patients Of West Bengal, India Journal of Cardiovascular Disease Research (), pp.1693-1701
49. Sahoo, Om Saswat; Pethusamy, Karthikeyan; Srivastava, Tryambak P; Talukdar, Joyeeta; Alqahtani, Mohammed S; Abbas, Mohamed; Dhar, Ruby; Karmakar, Subhradip; 2022 The metabolic addiction of cancer stem cells Frontiers in Oncology 12(), pp.955892
50. Mukherjee, Indrani; Singh, Sunil; Biswas, Subhrajit; Talukdar, Joyeeta; Alqahtani, Mohammed S; Abbas, Mohamed; Nag, Tapas Chandra; Mridha, Asit; Gupta, Surabhi; Sharma, Jai Bhagwan; 2022 Monosodium glutamate (MSG) perturbs trophoblast differentiation and invasion program through a ROS-mediated pathway (), pp.
51. Jalandra, Rekha; Dhar, Ruby; Pethusamy, Karthikeyan; Sharma, Minakshi; Karmakar, Subhradip; 2022 Dysbiosis: Gut feeling F1000Research 11(), pp.911
52. Talukdar, Joyeeta; Srivastava, Tryambak; Karmakar, Abhibrato; Purkaystha, Kakali; Goswami, Sandeep; Kumar, Arun; Dhar, Ruby; Karmakar, Subhradip; 2022 Malaria vaccine: The tale of terror, triumph, tyranny, and trust Asian Journal of Medical Sciences 13(9), pp.252-257
53. Pethusamy, Karthikeyan; Seethy, Ashikh; Dhar, Ruby; Karmakar, Abhibroto; Chaudhary, Shilpi; Bakhshi, Sameer; Palanichamy, Jayanth Kumar; Chopra, Anita; Chauhan, Shyam S; Karmakar, Subhradip; 2022 Loss of TET2 with reduced genomic 5-hmC is associated with adverse-risk AML Leukemia & Lymphoma 63(14), pp.3426-3432
54. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2022 Neglected tropical disease: Why we need to prioritize them more Asian Journal of Medical Sciences 13(10), pp.45323
55. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2022 Artificial intelligence in healthcare: Setting new algo RHYTHM in medicine Asian Journal of Medical Sciences 13(11), pp.45323
56. Saluja, Sumedha; Ganguly, Shuvadeep; Jain, Ayushi; Singh, Jay; Pethusamy, Karthikeyan; Chaudhary, Shilpi; Chattopadhyay, Parthaprasad; Singh, Archna; Chopra, Anita; Karmakar, Subhradip; 2022 IGF2BP3 Expression Correlates with Poor Survival in Primary and Relapsed Pediatric B-ALL (B-cell Acute Lymphoblastic Leukemia) in an Indian Cohort Blood 140(Supplement 1), pp.11526-11527
57. Sharma, P; Kumar, M; Gupta, VB; Kumar, G; Karmakar, S; 2022 Post COVID 19 fungal lung infections: Experience from a tertiary care Institute Lung India (), pp.S156-S156
58. Seethy, Ashikh A; Singh, Sunil; Mukherjee, Indrani; Pethusamy, Karthikeyan; Purkayastha, Kakali; Sharma, Jai Bhagwan; Sharma, Radhey S; Dhar, Ruby; Karmakar, Subhradip; 2021 Potential SARS-CoV-2 interactions with proteins involved in trophoblast functions–an in-silico study Placenta 103(), pp.141-151
59. Nayak, Brusabhanu; Panaiyadiyan, Sridhar; Singh, Prabhjot; Karmakar, Subhradip; Kaushal, Seema; Seth, Amlesh; 2021 Role of circulating tumor cells in patients with metastatic clear-cell renal cell carcinoma Urologic Oncology: Seminars and Original Investigations 39(2), pp.135. e9-135. e15
60. Pethusamy, Karthikeyan; Seethy, Ashikh A; Kulandhasamy, Maheshwari; Garg, Pinky; Chowdhury, Debashish; Agarwal, Sarita; Kumar, Arun; Dhar, Ruby; Karmakar, Subhradip; 2021 Effects of 469 E/K polymorphism of ICAM1 gene in ischemic stroke and its association with stroke severity and outcome Asian Journal of Medical Sciences 12(1), pp.3
61. Chattopadhyay, Indranil; Dhar, Ruby; Pethusamy, Karthikeyan; Seethy, Ashikh; Srivastava, Tryambak; Sah, Ramkishor; Sharma, Jyoti; Karmakar, Subhradip; 2021 Exploring the role of gut microbiome in colon cancer Applied biochemistry and biotechnology 193(), pp.1780-1799
62. Dhar, Ruby; Jee, Babban; Karmakar, Subhradip; 2021 Balancing healthcare and economy amidst the COVID-19 pandemic: An Indian experience Risk Management and Healthcare Policy (), pp.827-833
63. Seethy, Ashikh; Pethusamy, Karthikeyan; Chattopadhyay, Indranil; Sah, Ramkishor; Chopra, Anita; Dhar, Ruby; Karmakar, Subhradip; 2021 TETology: epigenetic mastermind in action Applied Biochemistry and Biotechnology 193(), pp.1701-1726
64. Jee, Babban; Dhar, Ruby; Singh, Sunil; Karmakar, Subhradip; 2021 Heat shock proteins and their role in pregnancy: redefining the function of “old rum in a new bottle” Frontiers in Cell and Developmental Biology 9(), pp.648463
65. Talukdar, Joyeeta; Karmakar, Abhibroto; Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2021 Non Government Organizations (NGO)-The gap fillers in oncology care during COVID-19 lockdown in Assam, India Asian Journal of Medical Sciences 12(6), pp.115
66. Dhar, Ruby; Pethusamy, Karthikeyan; Talukdar, Joyeeta; Karmakar, Abhibrato; Kumar, Arun; Karmakar, Subhradip; 2021 The curious case of COVID-19: Its murky origin, negligence and a botched international attempt for a cover-up Asian Journal of Medical Sciences 12(7), pp.147
67. Dhar, Ruby; Seethy, Ashikh; Singh, Sunil; Pethusamy, Karthikeyan; Srivastava, Tryambak; Talukdar, Joyeeta; Rath, Goura Kishor; Karmakar, Subhradip; 2021 Cancer immunotherapy: Recent advances and challenges Journal of Cancer Research and Therapeutics 17(4), pp.834-844
68. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2021 Menopause and COVID19 severity: The missing link Asian Journal of Medical Sciences (), pp.45352
69. Mukherjee, Indrani; Dhar, Ruby; Singh, Sunil; Sharma, Jai Bhagwan; Nag, Tapas Chandra; Mridha, Asit Ranjan; Jaiswal, Parul; Biswas, Subhrajit; Karmakar, Subhradip; 2021 Oxidative stress-induced impairment of trophoblast function causes preeclampsia through the unfolded protein response pathway Scientific Reports 11(1), pp.18415
70. Dhar, Ruby; Pethusamy, Karthikeyan; Jee, Babban; Karmakar, Subhradip; 2021 Fault lines in India’s COVID-19 management: lessons learned and future recommendations Risk Management and Healthcare Policy (), pp.4379-4392
71. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2021 Spatial transcriptomics: Gene expression in space, time and numbers Asian Journal of Medical Sciences 12(11), pp.45323
72. Saluja, Sumedha; Singh, Jay; Jain, Ayushi; Chaudhary, Shilpi; Pethusamy, Karthikeyan; Chattopadhyay, Parthaprasad; Bakhshi, Sameer; Chopra, Anita; Singh, Archna; Karmakar, Subhradip; 2021 Delineating the Role of Interplay between m6A Machinery Genes and IGF2BP Group of RNA-Binding Proteins in B-Cell Acute Lymphoblastic Leukemia (B-ALL) Blood 138(), pp.4472
73. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2021 The science of “smell” and the noble for “hugs:” making “sense?” Asian Journal of Medical Sciences 12(12), pp.45323
74. Bagri, Narendra Kumar; Karmakar, Subhradip; Haldar, Partha; Lodha, Rakesh; Kabra, SK; 2021 Role of serum MRP8/14 in predicting response to methotrexate in children with juvenile idiopathic arthritis JCR: Journal of Clinical Rheumatology 27(8), pp.e336-e341
75. Deka, Kamalika Bhandari; Sarma, Pallavi; Sarma, Anupam; Das, Gaurav; Karmakar, Subhradip; Rath, Goura Kishore; Rai, Avdhesh Kumar; 2021 Prevalence of Epstein–Barr virus in North-East Indian breast cancer patients’ blood Annals of Oncology Research and Therapy 1(2), pp.111-115
76. Dhar, Ruby; Kumar, Arun; Karmakar, Subhradip; 2021 Shaping the landscape of eukaryotic gene expression: horizontal gene transfer Asian Journal of Medical Sciences 12(10), pp.45323
77. Sil, Suparba; Dhar, Ruby; Karmakar, Subhradip; 2021 The perils of the pandemic and India’s child victims of COVID-19. International Journal 10(4), pp.149
78. Seethy, Ashikh A; Singh, Sunil; Mukherjee, Indrani; Pethusamy, Karthikeyan; Purkayastha, Kakali; Sharma, Jai Bhagwan; Dhar, Ruby; Karmakar, Subhradip; 2020 An In Silico Analysis of Potential SARS-CoV-2 Interactions with Proteins Involved in Placental Functions (), pp.
79. Dhar, Ruby; Sinha, Akhauri Yash; Seethy, Ashikh; Matta, Sri Anusha; Pethusamy, Karthikeyan; Srivastava, Trymbak; Singh, Sunil; Mukherjee, Indrani; Sarkar, Sajib; Minocha, Rashmi; 2020 Genotypic and antigenic study of SARS-CoV-2 from an Indian isolate bioRxiv (), pp.2020.06. 10.140657
80. Karmakar, Subhradip; Dhar, Ruby; Jee, Babban; 2020 Covid-19: research methods must be flexible in a crisis bmj 370(), pp.
81. Karmakar, Subhradip; Dhar, R; Purkayastha, K; Seth, R; Karmakar, S; 2020 To investigate the role of BRAF V600E co-occurring mutations in Langerhans cell histiocytosis (LCH) Cancer Research 80(16_Supplement), pp.3127-3127
82. Dhar, Ruby; Singh, Sunil; Mukherjee, Indrani; Pethusamy, Karthikeyan; Purkayastha, Kakali; Das, Prasenjit; Sharma, Jai Bhagwan; Sharma, Radhey Shyam; Karmakar, Subhradip; 2020 MTiness in pseudo-malignant behavior of trophoblasts during embryo implantation Frontiers in Bioscience-Landmark 26(4), pp.717-743
83. Dhar, Ruby; Jee, Babban; Pethusamy, Karthikeyan; Seethy, Ashikh; Kumar, Arun; Karmakar, Subhradip; 2020 The scars of COVID19: Preparing for the collateral damages. Asian Journal of Medical Sciences 11(6), pp.
84. Sathe, Gajanan; George, Irene A; Deb, Barnali; Jain, Ankit P; Patel, Krishna; Nayak, Brusabhanu; Karmakar, Subhradip; Seth, Amlesh; Pandey, Akhilesh; Kumar, Prashant; 2020 Urinary glycoproteomic profiling of non-muscle invasive and muscle invasive bladder carcinoma patients reveals distinct N-glycosylation pattern of CD44, MGAM, and GINM1 Oncotarget 11(34), pp.3244
85. Dhar, Ruby; Jee, Babban; Talwar, Gursaran Pran; Karmakar, Subhradip; 2020 Repurposing anti-tuberculosis and anti-leprosy vaccine against COVID-19 disease: an Indian experience Current Science (), pp.1078-1079
86. Dhar, Ruby; Sinha, Akhauri Yash; Seethy, Ashikh A; Matta, Sri Anusha; Pethusamy, Karthikeyan; Srivastava, Trymbak; Singh, Sunil; Mukherjee, Indrani; Sarkar, Sajib; Minocha, Rashmi; 2020 Genotypic and antigenic study of SARS-CoV-2 from an Indian isolate.(preprint) (), pp.
87. Dhar, Ruby; Mukherjee, Indrani; Singh, Sunil; Goswami, Sandeep; Karmakar, S; 2019 Role of Carbon Monoxide Signaling During trophoblast Invasion in Humans Open Access Journal of Reprouctive Systems and Sexual Disorders 2(2), pp.186-191
88. Dhar, Ruby; Seethy, Ashikh; Pethusamy, Karthikeyan; Singh, Sunil; Rohil, Vishwajeet; Purkayastha, Kakali; Mukherjee, Indrani; Goswami, Sandeep; Singh, Rakesh; Raj, Ankita; 2019 De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing Gigascience 8(5), pp.giz038
89. Dhar, Ruby; Rath, Goura Kishor; Karmakar, Subhradip; 2019 FBXO4 as a novel ubiquitin ligase that targets Cyclin D in the pathogenesis of breast cancer. (), pp.
90. Dhar, Ruby; Pethusamy, Karthikeyan; Singh, Sunil; Mukherjee, Indrani; Seethy, Ashikh; Sengupta, Bharoti; Srivastava, Tryambak; Sarkar, Sajib; Mandal, Vikramjit; Karmakar, Madhumita; 2019 Draft genome of Ompok bimaculatus (Pabda fish) BMC Research Notes 12(), pp.45352
91. Zhou, Ying; Unno, Kenji; Hyjek, Elizabeth; Liu, Hui; Zimmerman, Todd; Karmakar, Subhradip; Putt, Karson S; Shen, Jiayin; Low, Philip S; Wickrema, Amittha; 2018 Expression of functional folate receptors in multiple myeloma Leukemia & lymphoma 59(12), pp.2982-2989
92. Kumar, Ashok; Sah, Roshan; Saha, Avijit; Karmakar, S; Roy, Arnab; Reddy, V Mahendra; 2018 Investigation of highly swirl stabilized spray combustion using low-cost computational techniques Proceeding of the 2nd National Aero Propulsion Conference at IIT Kharagpur, India (), pp.
93. Kathuria, S; Karmakar, S; Singh, A; Singh, SP; 2017 Squamous cell carcinoma arising from hypertrophic lichen planus Indian Dermatology Online Journal 8(4), pp.288-290
94. Dhar, R; Karmakar, S; 2016 Role of a novel ubiquitin ligase FBXO4 in pathogenesis of breast cancer EUROPEAN JOURNAL OF CANCER 54(), pp.S14-S14
95. Karmakar, S; 2016 Reduced DOCK4 expression leads to erythroid dysplasia in-7/del (7q) myelodysplastic syndromes EUROPEAN JOURNAL OF CANCER 54(), pp.S46-S47
96. Sundaravel, Sriram; Duggan, Ryan; Bhagat, Tushar; Ebenezer, David L; Liu, Hui; Yu, Yiting; Bartenstein, Matthias; Unnikrishnan, Madhu; Karmakar, Subhradip; Liu, Ting-Chun; 2015 Reduced DOCK4 expression leads to erythroid dysplasia in myelodysplastic syndromes Proceedings of the National Academy of Sciences 112(46), pp.E6359-E6368
97. Li, Guoqiang; Ci, Weimin; Karmakar, Subhradip; Chen, Ke; Dhar, Ruby; Fan, Zhixiang; Guo, Zhongqiang; Zhang, Jing; Ke, Yuwen; Wang, Lu; 2014 SPOP promotes tumorigenesis by acting as a key regulatory hub in kidney cancer Cancer cell 25(4), pp.455-468
98. Karmakar, S; 2014 Cell Based Immunotherapy: As a Promising Futuristic Solution for Effective Cancer Therapy Omics International 3(1), pp.105
99. McNerney, Megan E; Brown, Christopher D; Wang, Xiaoyue; Bartom, Elizabeth T; Karmakar, Subhradip; Bandlamudi, Chaitanya; Yu, Shan; Ko, Jinkyung; Sandall, Barry P; Stricker, Thomas; 2013 CUX1 is a haploinsufficient tumor suppressor gene on chromosome 7 frequently inactivated in acute myeloid leukemia Blood, The Journal of the American Society of Hematology 121(6), pp.975-983
100. Liu, Li; Karmakar, Subhradip; Dhar, Ruby; Mahajan, Milind; Choudhury, Alina; Weissman, Sherman; Pace, Betty S; 2013 Regulation of Gγ-globin gene by ATF2 and its associated proteins through the cAMP-response element PloS one 8(11), pp.e78253
101. Prasad, Sandip; Karmakar, Subhradip; Cai, Yi; VanderGriend, Donald; White, Kevin; Eggener, Scott; 2012 145 SPECKLE-TYPE POZ PROTEIN CYTOPLASMIC MISLOCALIZATION AND OVEREXPRESSION PROMOTE TUMOR GROWTH IN AN ORTHOTOPIC MURINE RENAL CELL CANCER MODEL The Journal of Urology 187(4S), pp.e60-e60
102. Landt, Stephen G; Marinov, Georgi K; Kundaje, Anshul; Kheradpour, Pouya; Pauli, Florencia; Batzoglou, Serafim; Bernstein, Bradley E; Bickel, Peter; Brown, James B; Cayting, Philip; 2012 ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia Genome research 22(9), pp.1813-1831
103. McNerney, Megan E; Brown, Christopher D; Wang, Xiaoyue; Karmakar, Subhradip; Bandlamudi, Chaitanya; Yu, Shan; Anastasi, John; Le Beau, Michelle M; White, Kevin; 2012 Abstract LB-411: RNA sequencing reveals CUX1 to be a conserved tumor suppressor in acute myeloid leukemia associated with loss or deletion of chromosome 7 Cancer Research 72(8_Supplement), pp.LB-411-LB-411
104. McNerney, Megan E; Brown, Christopher D; Wang, Xiaoyue; Karmakar, Subhradip; Bandlamudi, Chaitanya; Yu, Shan; Anastasi, John; Le Beau, Michelle M; White, Kevin; 2012 RNA sequencing reveals CUX1 to be a conserved tumor suppressor in acute myeloid leukemia associated with loss or deletion of chromosome 7 CANCER RESEARCH 72(), pp.
105. ENCODE Project Consortium; 2012 An integrated encyclopedia of DNA elements in the human genome Nature 489(7414), pp.57
106. Karmakar, S; 2012 Dilated cardiomyopathy: case report Reactions 1396(), pp.7
107. Stricker, TP; Brown, CD; Montoya, V; McNerney, M; Kittler, R; Karmakar, S; Grossman, RL; White, KP; 2011 A Complex Genetic Basis for Breast Cancer Subtypes LABORATORY INVESTIGATION 91(), pp.65A-65A
108. ENCODE Project Consortium; 2011 A user’s guide to the encyclopedia of DNA elements (ENCODE) PLoS biology 9(4), pp.e1001046
109. Ramakrishnan, Valya; Liu, Li; Karmakar, Subhradip; Mahajan, Milind; Weissman, Sherman M; Pace, Betty; 2010 The Role of p38 MAPK/CREB1 Signaling In γ-Globin Gene Regulation Blood 116(21), pp.1012
110. Karmakar, Subhradip; Mahajan, Milind C; Schulz, Vincent; Boyapaty, Gokul; Weissman, Sherman M; 2010 A multiprotein complex necessary for both transcription and DNA replication at the β‐globin locus The EMBO journal 29(19), pp.3260-3271
111. Mahajan, Milind C; Karmakar, Subhradip; Newburger, Peter E; Krause, Diane S; Weissman, Sherman M; 2009 Dynamics of α-globin locus chromatin structure and gene expression during erythroid differentiation of human CD34+ cells in culture Experimental hematology 37(10), pp.1143-1156. e3
112. Das, Chandana; Chaudhuri, Snehamay; Karmakar, Madan; Chakraborty, Sudipta; 2008 Uterine arteriovenous malformation as a rare cause of menorrhagia Online J Health Allied Scs 7(3), pp.4
113. Mahajan, Milind C; Karmakar, Subhradip; Weissman, Sherman M; 2008 Chromatin Structure and Transcription of the Human Alpha Globin Locus during Erythroid Differentation Blood 112(11), pp.3575
114. Mahajan, Milind C; Karmakar, Subhradip; Weissman, Sherman M; 2007 Control of beta globin genes Journal of cellular biochemistry 102(4), pp.801-810
115. Karmakar, Subhradip; Mahajan, Milind C; Weissman, Sherman M; 2007 Recruitment of Rad50 and MCM Complexes on the Human Beta Globin Locus Control Region (LCR): A Novel Role for LCR Hypersensitive Site 4 (HS4). (), pp.
116. Karmakar, Subhradip; Mahajan, Milind C; Weisman, Sherman M; 2007 Recruitment of RAD50 and MCM complexes on the human beta globin locus control region (LCR): A novel role for LCR hypersensitive site (HS4) BLOOD 110(11), pp.87A-87A
117. Dhar, Ruby; Karmakar, Subhradip; Sriraman, Rajan; Talwar, Gursaran Prasad; Das, Chandana; 2004 Efficacy of a Recombinant Chimeric Anti‐hCG Antibody to Prevent Human Cytotrophoblasts Fusion and Block Progesterone Synthesis American Journal of Reproductive Immunology 51(5), pp.358-363
118. Karmakar, Subhradip; Dhar, Ruby; Das, Chandana; 2004 Inhibition of cytotrophoblastic (JEG-3) cell invasion by interleukin 12 involves an interferon γ-mediated pathway Journal of Biological Chemistry 279(53), pp.55297-55307
119. Karmakar, Subhradip; Das, Chandana; 2004 Modulation of ezrin and E-cadherin expression by IL-1β and TGF-β1 in human trophoblasts Journal of reproductive immunology 64(45323), pp.47362
120. Karmakar, Subhradip; Das, Chandana; 2002 Regulation of trophoblast invasion by IL‐1β and TGF‐β1 American Journal of Reproductive Immunology 48(4), pp.210-219
121. Singh, RN; Surendra Singh, Surendra Singh; Karmakar, S; 2002 Effect of boron application on cauliflower in an acid alfisol. (), pp.
122. Karmakar, Subhradip; Kaushal, Seema; Seth, Amlesh; Role of circulating tumor cells in patients with metastatic clear-cell renal cell carcinoma (), pp.
123. Karmakar, S; Ghosh, A; Retrieving Hidden Friends: A Collusion Privacy Attack Against Online Friend Search Engine….. Y. Liu and N. Li 833 Secrecy Capacity Region of Fading Binary Z Interference Channel With Statistical CSIT………………………….. (), pp.